Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs75632692 | chr11:34773578 | T/A | 0 | 214 | 15.88 | 16.72 | 3.83 | KM Plot |
KIRP | rs75718255 | chr8:30034049 | CA/CAA | 1.59E-6 | 209 | 15.2 | 17 | 0.2 | KM Plot |
KIRP | rs757206 | chr16:19855866 | C/T | 5.81E-5 | 213 | 15.08 | 16.93 | 15.58 | KM Plot |
KIRP | rs75739606 | chr8:30036284 | T/C | 1.59E-6 | 209 | 15.2 | 17 | 0.2 | KM Plot |
KIRP | rs75766304 | chr19:16522811 | C/T | 4.71E-11 | 211 | 16.5 | 13.03 | 8.08 | KM Plot |
KIRP | rs75777123 | chr16:20446462 | C/G | 0.000387 | 212 | 16.45 | 13.6 | 1.73 | KM Plot |
KIRP | rs75782365 | chr6:26408551 | T/G | 1.99E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
KIRP | rs75853454 | chr10:74975172 | G/A | 6.31E-12 | 212 | 16.53 | 11.77 | 5.6 | KM Plot |
KIRP | rs7586307 | chr2:178138926 | T/C | 1.18E-5 | 210 | 11.43 | 12.93 | 16.43 | KM Plot |
KIRP | rs75878597 | chr16:20446601 | T/C | 0.000407 | 211 | 16.43 | 13.6 | 1.73 | KM Plot |
KIRP | rs76006973 | chr11:34826143 | G/A | 0 | 212 | 15.33 | 17 | 3.83 | KM Plot |
KIRP | rs76033784 | chr10:75535970 | A/G | 0 | 213 | 16.47 | 16.53 | 2.47 | KM Plot |
KIRP | rs76081635 | chr16:47740126 | A/G | 7.92E-8 | 214 | 17.2 | 12.9 | 10.83 | KM Plot |
KIRP | rs76089060 | chr11:34805862 | C/T | 0 | 214 | 15.88 | 16.72 | 3.83 | KM Plot |
KIRP | rs7611566 | chr3:99942320 | C/T | 3.3E-8 | 211 | 16.47 | 19.6 | 4.37 | KM Plot |